Welcome to AntiSplodge’s documentation!

The main functions are stored in the antisplodge file.

Contents:

• antisplodge package
  • AntiSplodge functions
    • CelltypeDeconvolver
      • CelltypeDeconvolver.Get()
      • CelltypeDeconvolver.Set()
      • CelltypeDeconvolver.forward()
      • CelltypeDeconvolver.training
    • DeconvolutionExperiment
      • DeconvolutionExperiment.generateTrainTestValidation()
      • DeconvolutionExperiment.loadCheckpoint()
      • DeconvolutionExperiment.setCellTypeColumn()
      • DeconvolutionExperiment.setVerbosity()
      • DeconvolutionExperiment.setupDataLoaders()
      • DeconvolutionExperiment.setupModel()
      • DeconvolutionExperiment.setupOptimizerAndCriterion()
      • DeconvolutionExperiment.splitTrainTestValidation()
    • SingleCellDataset
    • getConvolutedProfilesFromDistributions()
    • getMeanJSD()
    • getProportionFromCountVector()
    • multinomialSampler()
    • predict()
    • train()

Indices and tables

• Index

• Module Index

• Search Page